SKILL_MD
dnasp
by BioTender-max
36

Full reimplementation of DnaSP 6 for population genetics analysis of aligned DNA sequences. Covers nucleotide diversity, haplotype statistics, neutrality tests (Tajima's D, Fu & Li's D*/F*, R2), linkage disequilibrium (D, D', R², ZnS, Za, ZZ), minimum recombination (Rm), mismatch distribution, InDe…

Data / 数据分析Safe-ishScanned
SKILL_MD
torch-geometric
by BioTender-max
32

Guide for building Graph Neural Networks with PyTorch Geometric (PyG). Use this skill whenever the user asks about graph neural networks, GNNs, node classification, link prediction, graph classification, message passing networks, heterogeneous graphs, neighbor sampling, or any task involving torch_…

MLOps / AI 工程Safe-ishScanned

Comprehensive patient stratification for precision medicine by integrating genomic, clinical, and therapeutic data. Given a disease/condition, genomic data (germline variants, somatic mutations, expression), and optional clinical parameters, performs multi-phase analysis across 9 phases covering di…

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SKILL_MD
PCR Primer Design
by BioTender-max
24

Comprehensive PCR and qPCR primer design following MIQE 2.0 guidelines with automated validation.

Automation / 自动化Safe-ishScanned
SKILL_MD
24

Remove sequencing adapters from FASTQ files using Cutadapt and Trimmomatic. Supports single-end and paired-end reads, Illumina TruSeq, Nextera, and custom adapter sequences. Use when FastQC shows adapter contamination or before alignment of short reads.

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SKILL_MD
24

PLINK file formats, format conversion, and quality control filtering for population genetics. Convert between VCF, BED/BIM/FAM, and PED/MAP formats, apply MAF, genotyping rate, and HWE filters using PLINK 1.9 and 2.0. Use when working with PLINK format files or running QC.

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SKILL_MD
20

Skills for creating presentations, slides, and visual documentation.

Productivity / 办公效率Safe-ishScanned
SKILL_MD
may-britt-moser
by BioTender-max
11

一句话画像: 从挪威渔村走向诺贝尔领奖台的神经科学家,她发现了大脑内置的"GPS坐标系"——网格细胞(grid cells),揭开了哺乳动物空间导航与记忆编码的底层神经机制。

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